PoplarV1, Main, Exploration, bibRecord, 002321

Comparative genomic analysis of transgenic poplar dwarf mutant reveals numerous differentially expressed genes involved in energy flow.

Identifieur interne : 002321 ( Main/Exploration ); précédent : 002320; suivant : 002322

Comparative genomic analysis of transgenic poplar dwarf mutant reveals numerous differentially expressed genes involved in energy flow.

Auteurs : Su Chen [République populaire de Chine] ; Shuang Bai [République populaire de Chine] ; Guifeng Liu [République populaire de Chine] ; Huiyu Li [République populaire de Chine] ; Jing Jiang [République populaire de Chine]

Source :

International journal of molecular sciences [ 1422-0067 ] ; 2014.

RBID : pubmed:25192286

Descripteurs français

English descriptors

KwdEn :
- Carbohydrate Metabolism (genetics), Gene Expression Profiling (MeSH), Genes, Plant (MeSH), Mutation (MeSH), Phenotype (MeSH), Photosynthetic Reaction Center Complex Proteins (genetics), Plants, Genetically Modified (genetics), Plants, Genetically Modified (growth & development), Populus (genetics), Populus (growth & development), Tamaricaceae (genetics).
MESH :
- chemical , genetics : Photosynthetic Reaction Center Complex Proteins.
- genetics : Carbohydrate Metabolism, Plants, Genetically Modified, Populus, Tamaricaceae.
- growth & development : Plants, Genetically Modified, Populus.
- Gene Expression Profiling, Genes, Plant, Mutation, Phenotype.

Abstract

In our previous research, the Tamarix androssowii LEA gene (Tamarix androssowii late embryogenesis abundant protein Mrna, GenBank ID: DQ663481) was transferred into Populus simonii × Populus nigra. Among the eleven transgenic lines, one exhibited a dwarf phenotype compared to the wild type and other transgenic lines, named dwf1. To uncover the mechanisms underlying this phenotype, digital gene expression libraries were produced from dwf1, wild-type, and other normal transgenic lines, XL-5 and XL-6. Gene expression profile analysis indicated that dwf1 had a unique gene expression pattern in comparison to the other two transgenic lines. Finally, a total of 1246 dwf1-unique differentially expressed genes were identified. These genes were further subjected to gene ontology and pathway analysis. Results indicated that photosynthesis and carbohydrate metabolism related genes were significantly affected. In addition, many transcription factors genes were also differentially expressed in dwf1. These various differentially expressed genes may be critical for dwarf mutant formation; thus, the findings presented here might provide insight for our understanding of the mechanisms of tree growth and development.

DOI: 10.3390/ijms150915603
PubMed: 25192286
PubMed Central: PMC4200758

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 002022
to stream Main, to step Curation: 002022

Le document en format XML

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<front><div type="abstract" xml:lang="en">In our previous research, the Tamarix androssowii LEA gene (Tamarix androssowii late embryogenesis abundant protein Mrna, GenBank ID: DQ663481) was transferred into Populus simonii × Populus nigra. Among the eleven transgenic lines, one exhibited a dwarf phenotype compared to the wild type and other transgenic lines, named dwf1. To uncover the mechanisms underlying this phenotype, digital gene expression libraries were produced from dwf1, wild-type, and other normal transgenic lines, XL-5 and XL-6. Gene expression profile analysis indicated that dwf1 had a unique gene expression pattern in comparison to the other two transgenic lines. Finally, a total of 1246 dwf1-unique differentially expressed genes were identified. These genes were further subjected to gene ontology and pathway analysis. Results indicated that photosynthesis and carbohydrate metabolism related genes were significantly affected. In addition, many transcription factors genes were also differentially expressed in dwf1. These various differentially expressed genes may be critical for dwarf mutant formation; thus, the findings presented here might provide insight for our understanding of the mechanisms of tree growth and development. </div>
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Comparative genomic analysis of transgenic poplar dwarf mutant reveals numerous differentially expressed genes involved in energy flow.

Comparative genomic analysis of transgenic poplar dwarf mutant reveals numerous differentially expressed genes involved in energy flow.

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